BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H11SP1|AL430315
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1181 1826 0.0
>3x_Contig1181
Length = 5187
Score = 1826 bits (920), Expect = 0.0
Identities = 927/931 (99%)
Strand = Plus / Minus
Query: 7 caatcttamccaagatagcggaggcagcaaccacagatggtgacgctagatatgctaatg 66
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2505 caatcttacccaagatagcggaggcagcaaccacagatggtgacgctagatatgctaatg 2446
Query: 67 catccttagaacccattctacccttgaaatttctattagtggcagaaataccgacttggc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 catccttagaacccattctacccttgaaatttctattagtggcagaaataccgacttggc 2386
Query: 127 cctcttctaacaaaccagttccgagaccgatacatggtccacaacctgcaggaagaggca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 cctcttctaacaaaccagttccgagaccgatacatggtccacaacctgcaggaagaggca 2326
Query: 187 aacatccggcatttaatagcttttgccaagcaccagtagctcttgcttcggcttccactt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 aacatccggcatttaatagcttttgccaagcaccagtagctcttgcttcggcttccactt 2266
Query: 247 cagaagaggcggccgcmatgtagaactccacaccttctgccactttgtgaacttggttga 306
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 cagaagaggcggccgcaatgtagaactccacaccttctgccactttgtgaacttggttga 2206
Query: 307 tgtcaccacttggacaaaccacatttgctgcactttccaaatcacttaatctggagttgg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 tgtcaccacttggacaaaccacatttgctgcactttccaaatcacttaatctggagttgg 2146
Query: 367 tacaagaaactagataagctttgttgactttaatatcctgtttggaaagatcatccacgg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 tacaagaaactagataagctttgttgactttaatatcctgtttggaaagatcatccacgg 2086
Query: 427 tggaactgattttcacagaatttggtccactgacgtaatgtgtcaaagtggataaatcga 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 tggaactgattttcacagaatttggtccactgacgtaatgtgtcaaagtggataaatcga 2026
Query: 487 taatcaatttcttagcgtacttagcatcagggtctgcctgnaaagaatcagatttagcct 546
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2025 taatcaatttcttagcgtacttagcatcagggtctgcctgtaaagaatcagatttagcct 1966
Query: 547 gtagcccattgattctggcttcgttaattcttggatggttgtttccaaccttggtcaatc 606
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1965 gtagctcattgattctggcttcgttaattcttggatggttgtttccaaccttggtcaatc 1906
Query: 607 tgttgcgatagaaatcaagaagcacattatcgactgggaataacccggaaagagcacccc 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1905 tgttgcgatagaaatcaagaagcacattatcgactgggaataacccggaaagagcacccc 1846
Query: 667 attcggtggtcatattggcaattgttaatctataatcgataggaatcttatctaaagagt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1845 attcggtggtcatattggcaattgttaatctataatcgataggaatcttatctaaagagt 1786
Query: 727 caccagtgaattcgatggcatgattcaatacttgatcctggttgaaaacaccacataaag 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 caccagtgaattcgatggcatgattcaatacttgatcctggttgaaaacaccacataaag 1726
Query: 787 ccacaatgatatctttaccggaaatcccagctggtaactctcccttcaactccacttgag 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 ccacaatgatatctttaccggaaatcccagctggtaactctcccttcaactccacttgag 1666
Query: 847 ccaccggaggaatctgccaccaagtttgaccagtggcccaaatggctgctgcatcggtac 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 ccaccggaggaatctgccaccaagtttgaccagtggcccaaatggctgctgcatcggtac 1606
Query: 907 gcacgatcggagtaccaagcgcaccaatacc 937
|||||||||||||||||||||||||||||||
Sbjct: 1605 gcacgatcggagtaccaagcgcaccaatacc 1575
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5808
Number of Sequences: 1807
Number of extensions: 5808
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)